Code to produce the figures in "From first principles to ecosystem structure andfunction of unicellular plankton":
R code to produce the figures:
* makefigures.R. Code to do almost all figures. run "plotAll()".
* app.R. Shiny app with the chemostat setup.
* modelChemostat.R. Code for the chemostat runs
* model.R. Core routines for the unicellular model.
* basetools.R. Plotting routines.
* matlab: code to run the two figures with the water column and global setups
* lib: Pre-compiled versions of the NUMmodel library needed to do the simulations. Note that you need to rename the library to fit your operating system.